Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798051.1_cds_XP_016458202.1_5145
CDS Infomation

[gene=LOC107781894] [db_xref=GeneID:107781894] [protein=protein AUXIN SIGNALING F-BOX 2-like] [protein_id=XP_016458202.1] [location=complement(join(4932..5702,5789..6284,7000..7472))] [gbkey=CDS]
Sequence

ATGTGTTTGTGTCAATGTATGATGAATTACTTCCCTGAGGAAGTGTTGGAGCATGTCTTC
AATTTCTTGACTTCCCACAGGGACCGAAATGCGGTCTCTTTGGTCTGTAATTCCTGGTAT
AGAGTTGAGAGGTTCAGTAGAGAGAAGGTTTTTGTAGGGAATTGTTACGCGGTAAGCCCC
GAGAGAGTGATTGCTAGGTTTCCGAGGCTTAGGTCGCTTACCTTGAAAGGGAAGCCCCAT
TTTGCGGATTTCAATTTGGTCCCTCATGATTGGGGAGGTTATGTTGACCCTTGGATTGAG
GCGATGGCCGCGAGTGGTGTGAACTTGGAGGAGCTTCGTTTGAAGAGGATGGTGGTTTCG
GATGAGAGCCTTGAGCTACTCTCGCGATCCTTTCCTAATTTTAAGTCTTTGATATTGGTT
AGCTGTGAAGGTTTCTCCACTGATGGTCTTGCTGCTATTGCTTCCAATTGCAGGTTTTTA
AGGGAGTTGGATTTGCAGGAAAATGAAGTCGAAGATCGTAGAGGGCAGTGGCTTAGTTGT
TTTTCAGAGAGCTGCACTACTCTTGTCTCTTTGAATTTTGCCTGCCTCAAAGGAGAAGTT
AACTTGGCAGCTCTTGAGAGGCTAGTGGCTAGATGTCCAAACCTAAGAAGTCTGAGATTA
AATCATACTGTGCCTCTTGATGCTCTTCAAAGGATTTTAGTTAAAGCTCCTCACTTAGTG
GACTTGGGGACAGGGACTTTTGTCAGTGATCCAGTTTCTGAGACTTACAACAAACTAAAG
AATGCTCTGCAGAGGTGTACTTCTATTAGGAGCTTGTCGGGGTTCTTGGAGGTTGCTCCT
CGCTGCCTGCCTGCTATTTATCCAATTTGCCTGAATTTGTCGTCTCTGAACTTGAGCTAC
GCACCTGGAATCTACAGTGCTGAACTTATAAAGCTGATTCGTTTCTGTGGAAAATTAGAG
CGCCTATGGATTTTGGATACTATTGGAGATAAAGGGCTAGGTGTTGTGGCTTCTACTTGT
AAAGAATTGCAGGAATTAAGGGTCTTCCCATCTGACCTTCATGGATTTGGCCATGCTGCT
GTAACTGAAGAGGGCTTGGTTGCAATATCAGCCGGTTGTCCAAAACTCAACTCATTATTG
TATTTCTGCCAGCAGATGACTAATGCTGCACTTATAACCGTTGCCAAAAATTGCCCAAAC
TTTATTCGTTTTAGATTGTGCACTCTTAACCCAACTGTGCCAGACGCAGTTACCATGCAG
CCACTAGACGAAGGTTTTGGGGCAATTGTACAGTCGTGCAAAGGCCTCAAGCGGCTGTCA
GTCTCTGGTCTTCTAACTGATCAGGTTTTCCTTTACATAGGAATGTATGCTGAGCAGCTT
GAGATGCTCTCCATAGCCTTTGCTGGAGATAGTGACAAGGGGATGCTATATGTGTTGAAC
GGGTGCAAGAAAATGAAAAAGCTTGAGATCAGGGATAGCCCTTTTGGTAATGTGGCACTT
CTGGCGGACGTGGGGAAGTATGAGACAATGCGATCCCTTTGGATGTCGTCCTGCCAAGTG
ACCCTTGGAGCATGCAAGGCTGTTGCTCAGAAGATGCCGAGGCTCAATGTGGAGATCATC
AGTGAGAGCGACCAGACAGACACTTGCTCTGATGATAGGCAAAAGGTAGAGAAGATGTAC
TTGTATCGAACATTGGTTGGTCCCAGGAAGGATGCACCAGATTTCGTCCGGACGTTGTAG

Peptide Sequence

PEP ID

XP_016458202.1
PEP Infomation

PREDICTED: protein AUXIN SIGNALING F-BOX 2-like [Nicotiana tabacum]
Sequence

MCLCQCMMNYFPEEVLEHVFNFLTSHRDRNAVSLVCNSWYRVERFSREKVFVGNCYAVSP
ERVIARFPRLRSLTLKGKPHFADFNLVPHDWGGYVDPWIEAMAASGVNLEELRLKRMVVS
DESLELLSRSFPNFKSLILVSCEGFSTDGLAAIASNCRFLRELDLQENEVEDRRGQWLSC
FSESCTTLVSLNFACLKGEVNLAALERLVARCPNLRSLRLNHTVPLDALQRILVKAPHLV
DLGTGTFVSDPVSETYNKLKNALQRCTSIRSLSGFLEVAPRCLPAIYPICLNLSSLNLSY
APGIYSAELIKLIRFCGKLERLWILDTIGDKGLGVVASTCKELQELRVFPSDLHGFGHAA
VTEEGLVAISAGCPKLNSLLYFCQQMTNAALITVAKNCPNFIRFRLCTLNPTVPDAVTMQ
PLDEGFGAIVQSCKGLKRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDSDKGMLYVLN
GCKKMKKLEIRDSPFGNVALLADVGKYETMRSLWMSSCQVTLGACKAVAQKMPRLNVEII
SESDQTDTCSDDRQKVEKMYLYRTLVGPRKDAPDFVRTL

Transcript Sequence

Gene sequence data has not been registered.